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interpro motif occurrence  (InterPro Inc)

 
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    InterPro Inc interpro motif occurrence
    Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative <t>orthologous</t> gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina
    Interpro Motif Occurrence, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/interpro motif occurrence/product/InterPro Inc
    Average 90 stars, based on 1 article reviews
    interpro motif occurrence - by Bioz Stars, 2026-04
    90/100 stars

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    1) Product Images from "Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles"

    Article Title: Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

    Journal: BMC Genomics

    doi: 10.1186/s12864-016-3369-8

    Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative orthologous gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina
    Figure Legend Snippet: Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative orthologous gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina

    Techniques Used: Derivative Assay

    Number of putative orthologous gene clusters shared by the two mycorrhizal species with the other species included in the analysis
    Figure Legend Snippet: Number of putative orthologous gene clusters shared by the two mycorrhizal species with the other species included in the analysis

    Techniques Used:

    Results of FunCat enrichment analysis for the orthologous gene clusters including P. subalpina that were mainly restricted to pathogenic and saprophytic species
    Figure Legend Snippet: Results of FunCat enrichment analysis for the orthologous gene clusters including P. subalpina that were mainly restricted to pathogenic and saprophytic species

    Techniques Used: Control, Protein Binding, Binding Assay



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    interpro motif occurrence  (InterPro Inc)
    90
    InterPro Inc interpro motif occurrence
    Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative <t>orthologous</t> gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina
    Interpro Motif Occurrence, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/interpro motif occurrence/product/InterPro Inc
    Average 90 stars, based on 1 article reviews
    interpro motif occurrence - by Bioz Stars, 2026-04
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative orthologous gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina

    Journal: BMC Genomics

    Article Title: Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

    doi: 10.1186/s12864-016-3369-8

    Figure Lengend Snippet: Characterization of P. clusters enriched for pathogens or saprophytes. Principle component analysis (PCA) based on the presence/absence of species in putative orthologous gene clusters derived from QuartetS analysis. Figure 6a. PCA analysis based on 61 gene clusters enriched for saprophytic species. Figure 6b. PCA analysis based on 163 clusters enriched in pathogens. Figure 6c. Venn diagram showing the distribution of orthologous gene clusters for the two ectomycorrhizal species Tuber melanosporum and Cenococcum geophilum , the saprophyte/ericoid mycorrhizal species Oidiodendron maius as well as P. subalpina . Abbreviations of species are given in Table . Color code: green: mycorrhizal species, red: plant pathogens, purple: soil saprotrophs and blue: P. subalpina

    Article Snippet: To explore the unexpectedly large gene set, the proteome was compared to 13 ascomycetous proteomes (Table ) using orthologous cluster analysis, InterPro motif occurrence and a review of Carbohydrate-active enzymes (CAZymes).

    Techniques: Derivative Assay

    Number of putative orthologous gene clusters shared by the two mycorrhizal species with the other species included in the analysis

    Journal: BMC Genomics

    Article Title: Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

    doi: 10.1186/s12864-016-3369-8

    Figure Lengend Snippet: Number of putative orthologous gene clusters shared by the two mycorrhizal species with the other species included in the analysis

    Article Snippet: To explore the unexpectedly large gene set, the proteome was compared to 13 ascomycetous proteomes (Table ) using orthologous cluster analysis, InterPro motif occurrence and a review of Carbohydrate-active enzymes (CAZymes).

    Techniques:

    Results of FunCat enrichment analysis for the orthologous gene clusters including P. subalpina that were mainly restricted to pathogenic and saprophytic species

    Journal: BMC Genomics

    Article Title: Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

    doi: 10.1186/s12864-016-3369-8

    Figure Lengend Snippet: Results of FunCat enrichment analysis for the orthologous gene clusters including P. subalpina that were mainly restricted to pathogenic and saprophytic species

    Article Snippet: To explore the unexpectedly large gene set, the proteome was compared to 13 ascomycetous proteomes (Table ) using orthologous cluster analysis, InterPro motif occurrence and a review of Carbohydrate-active enzymes (CAZymes).

    Techniques: Control, Protein Binding, Binding Assay